Sequence Similarity Clusters for the Entities in PDB 1L2G

Entity #1 | Chains: A,B,C,D
Glycoprotein D protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5678
95 % 4 6 5082 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.0
PDBFlex
90 % 4 6 5105
70 % 7 9 3498
50 % 7 9 3416
40 % 7 9 3305
30 % 7 9 3093

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.