Sequence Similarity Clusters for the Entities in PDB 1L2G

Entity #1 | Chains: A,B,C,D
Glycoprotein D protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5412
95 % 4 6 4838 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.9
PDBFlex
90 % 4 6 4856
70 % 7 9 3361
50 % 7 9 3288
40 % 7 9 3191
30 % 7 9 2981

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.