Sequence Similarity Clusters for the Entities in PDB 1L1O

Entity #1 | Chains: A,D
Replication protein A 14 kDa subunit protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 13577
95 % 3 3 12921
90 % 3 3 12713
70 % 3 3 11984
50 % 3 3 10699
40 % 3 3 9707
30 % 3 3 8451
Entity #2 | Chains: B,E
Replication protein A 32 kDa subunit protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 9442
95 % 4 4 9577
90 % 4 4 9477
70 % 4 4 9056
50 % 4 4 8192
40 % 4 4 7507
30 % 5 6 4600
Entity #3 | Chains: C,F
Replication protein A 70 kDa DNA-binding subunit protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41957
95 % 1 1 31789
90 % 1 1 30422
70 % 1 1 27213
50 % 1 1 23239
40 % 1 1 20439
30 % 1 1 17308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.