Sequence Similarity Clusters for the Entities in PDB 1L1D

Entity #1 | Chains: A,B
peptide methionine sulfoxide reductase protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41795
95 % 2 3 8965 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 8870
70 % 2 3 8529
50 % 2 3 8049
40 % 2 3 7361
30 % 2 3 6408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3HCG 1 A, B, C, D Peptide methionine sulfoxide reductase msrA/msrB MsrB domain (UNP residues 377-522) 487 1.8.4.12 | Details
2 1L1D 1 A, B peptide methionine sulfoxide reductase MsrB domain, C-terminal domain 485 1.8.4.13 | Details 1.8.4.14 | Details
3 3HCH 1 A, B Peptide methionine sulfoxide reductase msrA/msrB MsrB domain (UNP residues 377-522) 487 1.8.4.12 | Details