Sequence Similarity Clusters for the Entities in PDB 1L1D

Entity #1 | Chains: A,B
peptide methionine sulfoxide reductase protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42289
95 % 2 3 9079 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 8988
70 % 2 3 8632
50 % 2 3 8136
40 % 2 3 7445
30 % 2 3 6478

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures