Sequence Similarity Clusters for the Entities in PDB 1L1C

Entity #1 | Chains: C
licT mRNA antiterminator hairpin rna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Transcription antiterminator licT protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31870
95 % 1 1 27720
90 % 1 1 26680
70 % 1 1 24060
50 % 1 1 20658
40 % 1 1 18223
30 % 1 1 15272

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1L1C 2 A, B Transcription antiterminator licT RNA binding domain (residues 1-55) 1423