Sequence Similarity Clusters for the Entities in PDB 1L1C

Entity #1 | Chains: C
licT mRNA antiterminator hairpin rna, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Transcription antiterminator licT protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50413
95 % 1 1 37608
90 % 1 1 35876
70 % 1 1 31860
50 % 1 1 27203
40 % 1 1 24019
30 % 1 1 20382

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures