Sequence Similarity Clusters for the Entities in PDB 1L0Y

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7133
95 % 5 11 3090 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.6
PDBFlex
90 % 6 16 1915
70 % 135 302 41
50 % 135 305 77
40 % 135 305 93
30 % 2967 5461 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20865
95 % 3 8 1723 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 8 1758
70 % 3 8 1778
50 % 40 56 492
40 % 42 59 482
30 % 64 88 322

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.