Sequence Similarity Clusters for the Entities in PDB 1L0Y

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7032
95 % 5 11 3047 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.6
PDBFlex
90 % 6 16 1892
70 % 134 297 45
50 % 134 300 77
40 % 134 300 95
30 % 2935 5392 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20494
95 % 3 8 1701 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 8 1734
70 % 3 8 1752
50 % 40 56 488
40 % 42 59 473
30 % 64 88 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.