Sequence Similarity Clusters for the Entities in PDB 1L0Y

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7227
95 % 5 11 3135 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.5
PDBFlex
90 % 7 19 1600
70 % 139 312 29
50 % 139 315 73
40 % 139 315 93
30 % 3055 5606 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21101
95 % 3 8 1744 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 8 1781
70 % 3 8 1803
50 % 40 57 492
40 % 42 60 482
30 % 64 89 322

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.