Sequence Similarity Clusters for the Entities in PDB 1L0X

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7479
95 % 7 11 3250 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.5
PDBFlex
90 % 14 21 1523
70 % 261 343 25
50 % 261 346 67
40 % 261 346 89
30 % 4367 5941 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21864
95 % 6 8 1828 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 8 1868
70 % 6 8 1882
50 % 50 57 510
40 % 53 60 498
30 % 78 89 349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures