Sequence Similarity Clusters for the Entities in PDB 1L0X

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 8127
95 % 7 11 3220 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.6
PDBFlex
90 % 14 21 1544
70 % 265 350 25
50 % 265 353 68
40 % 265 353 88
30 % 5306 7269 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 5585
95 % 6 8 1859 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 8 1900
70 % 6 8 1915
50 % 50 57 513
40 % 53 60 509
30 % 79 90 364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures