Sequence Similarity Clusters for the Entities in PDB 1L0X

Entity #1 | Chains: A,C
14.3.d T cell receptor beta chain protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7371
95 % 7 11 3214 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.5
PDBFlex
90 % 14 21 1506
70 % 234 314 29
50 % 234 317 75
40 % 234 317 96
30 % 4237 5780 1
Entity #2 | Chains: B,D
Exotoxin type A protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21555
95 % 6 8 1782 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 8 1821
70 % 6 8 1844
50 % 50 57 506
40 % 53 60 490
30 % 78 89 339

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures