Sequence Similarity Clusters for the Entities in PDB 1L0V

Entity #1 | Chains: A,M
Fumarate reductase flavoprotein subunit protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 2432
95 % 8 13 2271 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 8 13 2328
70 % 8 13 2333
50 % 8 13 2316
40 % 18 23 1154
30 % 60 74 458
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 1992
95 % 7 12 2579 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 7 12 2637
70 % 7 12 2619
50 % 7 12 2597
40 % 7 12 2554
30 % 54 68 490
Entity #3 | Chains: C,O
Fumarate reductase 15 kDa hydrophobic protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 2281
95 % 7 12 2650 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 12 2703
70 % 7 12 2691
50 % 7 12 2659
40 % 7 12 2606
30 % 7 12 2462
Entity #4 | Chains: D,P
Fumarate reductase 13 kDa hydrophobic protein protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 2093
95 % 7 12 2666 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 7 12 2719
70 % 7 12 2704
50 % 7 12 2669
40 % 7 12 2616
30 % 7 12 2468

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures