Sequence Similarity Clusters for the Entities in PDB 1L0V

Entity #1 | Chains: A,M
Fumarate reductase flavoprotein subunit protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 2461
95 % 8 13 2317 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 8 13 2376
70 % 8 13 2383
50 % 8 13 2361
40 % 19 24 1137
30 % 61 75 458
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 2025
95 % 7 12 2618 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 7 12 2674
70 % 7 12 2660
50 % 7 12 2634
40 % 7 12 2588
30 % 54 68 494
Entity #3 | Chains: C,O
Fumarate reductase 15 kDa hydrophobic protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 2311
95 % 7 12 2689 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 12 2742
70 % 7 12 2730
50 % 7 12 2697
40 % 7 12 2643
30 % 7 12 2497
Entity #4 | Chains: D,P
Fumarate reductase 13 kDa hydrophobic protein protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 2124
95 % 7 12 2705 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 7 12 2759
70 % 7 12 2744
50 % 7 12 2707
40 % 7 12 2653
30 % 7 12 2504

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures