Sequence Similarity Clusters for the Entities in PDB 1L0V

Entity #1 | Chains: A,M
Fumarate reductase flavoprotein subunit protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3116
95 % 7 11 2738 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 7 11 2783
70 % 7 11 2761
50 % 7 11 2722
40 % 17 21 1232
30 % 59 72 466
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2180
95 % 7 11 2814 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 7 11 2859
70 % 7 11 2828
50 % 7 11 2782
40 % 7 11 2738
30 % 54 67 490
Entity #3 | Chains: C,O
Fumarate reductase 15 kDa hydrophobic protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2570
95 % 7 11 2858 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 11 2900
70 % 7 11 2858
50 % 7 11 2817
40 % 7 11 2779
30 % 7 11 2606
Entity #4 | Chains: D,P
Fumarate reductase 13 kDa hydrophobic protein protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2216
95 % 7 11 2863 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 7 11 2906
70 % 7 11 2863
50 % 7 11 2821
40 % 7 11 2784
30 % 7 11 2610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.