Sequence Similarity Clusters for the Entities in PDB 1L0V

Entity #1 | Chains: A,M
Fumarate reductase flavoprotein subunit protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 3006
95 % 7 11 2650 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 7 11 2695
70 % 7 11 2674
50 % 7 11 2645
40 % 17 21 1200
30 % 59 72 451
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2090
95 % 7 11 2720 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 7 11 2765
70 % 7 11 2739
50 % 7 11 2705
40 % 7 11 2662
30 % 54 67 474
Entity #3 | Chains: C,O
Fumarate reductase 15 kDa hydrophobic protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2475
95 % 7 11 2769 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 11 2811
70 % 7 11 2775
50 % 7 11 2746
40 % 7 11 2705
30 % 7 11 2531
Entity #4 | Chains: D,P
Fumarate reductase 13 kDa hydrophobic protein protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2129
95 % 7 11 2774 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 7 11 2817
70 % 7 11 2780
50 % 7 11 2751
40 % 7 11 2711
30 % 7 11 2536

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.