Sequence Similarity Clusters for the Entities in PDB 1L0P

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 448 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 23455
95 % 5 9 8737 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 5 9 8661
70 % 5 9 7908
50 % 5 9 7238
40 % 57 92 608
30 % 57 92 602

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1G94 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
2 1G9H 1 A ALPHA-AMYLASE COMPLEXED WITH TRI-SACCHARIDE AND TRIS 228 3.2.1.1 | Details
3 1AQM 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
4 1AQH 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
5 1L0P 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
6 1KXH 1 A alpha-amylase 228 3.2.1.1 | Details
7 1JD7 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
8 1B0I 1 A PROTEIN (ALPHA-AMYLASE) 228 3.2.1.1 | Details
9 1JD9 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details