Sequence Similarity Clusters for the Entities in PDB 1L0O

Entity #1 | Chains: A,B
Anti-sigma F factor protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6883
95 % 5 5 7477 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 5 7440
70 % 5 5 7230
50 % 5 5 6675
40 % 5 5 6217
30 % 5 5 5575
Entity #2 | Chains: C
sigma factor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60559
95 % 1 1 42728
90 % 1 1 40757
70 % 1 1 36068
50 % 1 1 30727
40 % 1 1 27098
30 % 1 1 22970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures