Sequence Similarity Clusters for the Entities in PDB 1L0O

Entity #1 | Chains: A,B
Anti-sigma F factor protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6744
95 % 5 5 7328 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 5 7289
70 % 5 5 7090
50 % 5 5 6544
40 % 5 5 6098
30 % 5 5 5461
Entity #2 | Chains: C
sigma factor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59446
95 % 1 1 41989
90 % 1 1 40082
70 % 1 1 35496
50 % 1 1 30264
40 % 1 1 26691
30 % 1 1 22640

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures