Sequence Similarity Clusters for the Entities in PDB 1L0O

Entity #1 | Chains: A,B
Anti-sigma F factor protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6482
95 % 5 5 7043 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 5 5 7012
70 % 5 5 6800
50 % 5 5 6288
40 % 5 5 5859
30 % 5 5 5255
Entity #2 | Chains: C
sigma factor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57410
95 % 1 1 40548
90 % 1 1 38751
70 % 1 1 34429
50 % 1 1 29395
40 % 1 1 25935
30 % 1 1 21993

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.