Sequence Similarity Clusters for the Entities in PDB 1L0O

Entity #1 | Chains: A,B
Anti-sigma F factor protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6579
95 % 5 5 7159 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 5 7123
70 % 5 5 6945
50 % 5 5 6405
40 % 5 5 5968
30 % 5 5 5344
Entity #2 | Chains: C
sigma factor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58238
95 % 1 1 41147
90 % 1 1 39307
70 % 1 1 34862
50 % 1 1 29719
40 % 1 1 26217
30 % 1 1 22237

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.