Sequence Similarity Clusters for the Entities in PDB 1L0M

Entity #1 | Chains: A
Bacteriorhodopsin protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 63 534
95 % 114 120 266
90 % 115 121 274
70 % 115 121 316
50 % 130 136 278
40 % 130 136 308
30 % 188 194 193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures