Sequence Similarity Clusters for the Entities in PDB 1L0A

Entity #1 | Chains: A
TNF receptor associated factor 3 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 12946
95 % 4 6 12434 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 4 6 12234
70 % 4 6 11534
50 % 16 19 907
40 % 20 23 732
30 % 24 27 670
Entity #2 | Chains: B
TRAF family member-associated NF-kappa-b activator protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.