Sequence Similarity Clusters for the Entities in PDB 1KZY

Entity #1 | Chains: A,B
CELLULAR TUMOR ANTIGEN P53 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 36 385
95 % 93 99 143 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 94 100 152
70 % 101 108 168
50 % 106 129 143
40 % 106 129 156
30 % 106 99 173
Entity #2 | Chains: C,D
TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13530
95 % 1 3 12800 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 3 12605
70 % 1 3 11881
50 % 1 3 10601
40 % 1 3 9565
30 % 1 3 8197

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures