Sequence Similarity Clusters for the Entities in PDB 1KZP

Entity #1 | Chains: A
Protein Farnesyltransferase alpha subunit protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 34 366
95 % 4 42 429 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 13 56 380
70 % 13 56 415
50 % 13 56 496
40 % 13 56 534
30 % 13 56 531
Entity #2 | Chains: B
Protein Farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 41 943
95 % 13 56 895 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 13 56 932
70 % 13 56 964
50 % 13 56 1012
40 % 13 56 1033
30 % 13 56 1012
Entity #3 | Chains: C
Farnesylated K-Ras4B peptide product protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.