Sequence Similarity Clusters for the Entities in PDB 1KZO

Entity #1 | Chains: A
Protein Farnesyltransferase alpha subunit protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 34 364
95 % 6 42 425
90 % 17 56 377
70 % 17 56 412
50 % 17 56 495
40 % 17 56 533
30 % 17 56 531
Entity #2 | Chains: B
Protein Farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 41 941
95 % 17 56 892 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 17 56 929
70 % 17 56 963
50 % 17 56 1012
40 % 17 56 1032
30 % 17 56 1011
Entity #3 | Chains: C
Farnesylated K-Ras4B peptide product protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.