Sequence Similarity Clusters for the Entities in PDB 1KZG

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36006
95 % 2 4 5720 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.7
PDBFlex
90 % 2 4 5745
70 % 2 4 5647
50 % 2 4 5340
40 % 2 4 5027
30 % 4 7 3556
Entity #2 | Chains: B,D
CDC42 HOMOLOG protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 23 1407
95 % 22 39 911 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 22 39 943
70 % 47 82 332
50 % 92 143 196
40 % 93 144 205
30 % 601 822 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures