Sequence Similarity Clusters for the Entities in PDB 1KZG

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33698
95 % 2 4 5317 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.7
PDBFlex
90 % 2 4 5334
70 % 2 4 5271
50 % 2 4 5002
40 % 2 4 4721
30 % 4 7 3351
Entity #2 | Chains: B,D
CDC42 HOMOLOG protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 22 1367
95 % 21 37 891 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 21 37 924
70 % 45 78 309
50 % 87 137 186
40 % 88 138 202
30 % 551 763 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.