Sequence Similarity Clusters for the Entities in PDB 1KZD

Entity #1 | Chains: 1,2
MANNOSE-BINDING PROTEIN C protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 13 1666
95 % 13 13 2212 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 13 13 2269
70 % 13 13 2264
50 % 15 16 1790
40 % 15 16 1791
30 % 15 16 1748

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures