Sequence Similarity Clusters for the Entities in PDB 1KZB

Entity #1 | Chains: 1,2
MANNOSE-BINDING PROTEIN C protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 1927
95 % 9 13 2233 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 9 13 2286
70 % 9 13 2295
50 % 11 16 1820
40 % 11 16 1800
30 % 11 16 1753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2MSB 1 A, B MANNOSE-BINDING PROTEIN-A 10117
2 1RDO 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
3 1RDL 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
4 1YTT 1 A, B MANNOSE-BINDING PROTEIN A MAD DATA TAKEN ON FROZEN CRYSTAL (110K) SUBTILISIN FRAGMENT RESIDUES 107 - 221 10116
5 1RDJ 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
6 1KZA 1 1, 2 MANNOSE-BINDING PROTEIN C SUBTILISIN FRAGMENT (RESIDUES 129-243 of P08661) 10116
7 1RDI 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
8 1RDN 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
9 1RDK 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
10 1KZE 1 1, 2 MANNOSE-BINDING PROTEIN C SUBTILISIN FRAGMENT (RESIDUES 129-243 of P08661) 10116
11 1KZB 1 1, 2 MANNOSE-BINDING PROTEIN C SUBTILISIN FRAGMENT (RESIDUES 129-243 of P08661) 10116
12 1RDM 1 1, 2 MANNOSE-BINDING PROTEIN-C SUBTILISIN FRAGMENT (RESIDUES 114 - 226) 10117
13 1BV4 1 A, B, C, D PROTEIN (MANNOSE-BINDING PROTEIN-C) SUBTILISIN FRAGMENT 10116
14 1KZC 1 1, 2 MANNOSE-BINDING PROTEIN C SUBTILISIN FRAGMENT (RESIDUES 129-243 of P08661) 10116
15 1KZD 1 1, 2 MANNOSE-BINDING PROTEIN C SUBTILISIN FRAGMENT (RESIDUES 129-243 of P08661) 10116
16 1MSB 1 A, B MANNOSE-BINDING PROTEIN-A 10117