Sequence Similarity Clusters for the Entities in PDB 1KZ7

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34767
95 % 1 4 5517 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.7
PDBFlex
90 % 1 4 5537
70 % 1 4 5454
50 % 1 4 5162
40 % 1 4 4870
30 % 3 7 3444
Entity #2 | Chains: B,D
CDC42 HOMOLOG protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 22 1419
95 % 10 37 911 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 10 37 944
70 % 29 78 324
50 % 63 137 193
40 % 64 138 208
30 % 484 782 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.