Sequence Similarity Clusters for the Entities in PDB 1KZ7

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 5753
95 % 1 4 5920 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.7
PDBFlex
90 % 1 4 5930
70 % 1 4 5803
50 % 1 4 5243
40 % 3 6 4509
30 % 3 7 3439
Entity #2 | Chains: B,D
CDC42 HOMOLOG protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 26 1412
95 % 10 39 918 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 10 39 948
70 % 29 82 334
50 % 67 145 194
40 % 67 145 211
30 % 523 837 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures