Sequence Similarity Clusters for the Entities in PDB 1KYP

Entity #1 | Chains: A
Green Fluorescent Protein protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 23798
95 % 46 252 64 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 47 292 36
70 % 49 297 30
50 % 49 299 76
40 % 49 312 80
30 % 60 523 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures