Sequence Similarity Clusters for the Entities in PDB 1KYO

Entity #1 | Chains: A,L
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24067
95 % 7 8 5838
90 % 7 8 5839
70 % 7 8 5710
50 % 7 8 5363
40 % 7 8 5041
30 % 22 53 647
Entity #10 | Chains: J,U
HEAVY CHAIN (VH) OF FV-FRAGMENT protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5438
95 % 7 8 6061
90 % 7 8 6051
70 % 34 39 1041
50 % 402 504 8
40 % 672 844 5
30 % 753 970 7
Entity #11 | Chains: K,V
LIGHT CHAIN (VL) OF FV-FRAGMENT protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5459
95 % 7 8 6081
90 % 7 8 6069
70 % 143 184 74
50 % 229 295 22
40 % 673 844 5
30 % 754 970 7
Entity #12 | Chains: W
CYTOCHROME C, ISO-1 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 14 1955
95 % 46 65 413
90 % 50 69 406
70 % 50 69 447
50 % 86 128 184
40 % 106 153 175
30 % 106 153 190
Entity #2 | Chains: B,M
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 protein, length: 352 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5254
95 % 7 8 5883
90 % 7 8 5879
70 % 7 8 5742
50 % 7 8 5397
40 % 7 8 5069
30 % 7 8 4551
Entity #3 | Chains: C,N
CYTOCHROME B protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 10980
95 % 7 8 5862
90 % 7 8 5862
70 % 7 8 5727
50 % 22 52 612
40 % 27 60 463
30 % 27 60 454
Entity #4 | Chains: D,O
CYTOCHROME C1, HEME PROTEIN protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5324
95 % 7 8 5946
90 % 7 8 5940
70 % 7 8 5811
50 % 22 49 659
40 % 22 49 698
30 % 27 57 480
Entity #5 | Chains: E,P
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5384
95 % 7 8 6008
90 % 7 8 5999
70 % 7 8 5860
50 % 22 49 677
40 % 27 57 485
30 % 27 57 484
Entity #6 | Chains: F,Q
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 10192
95 % 5 6 10183
90 % 5 6 10056
70 % 5 6 9535
50 % 5 6 8676
40 % 5 6 7946
30 % 5 6 7008
Entity #7 | Chains: G,R
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5439
95 % 7 8 6062
90 % 7 8 6052
70 % 7 8 5908
50 % 7 8 5541
40 % 7 8 5193
30 % 7 8 4662
Entity #8 | Chains: H,S
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5468
95 % 7 8 6089
90 % 7 8 6077
70 % 7 8 5929
50 % 7 8 5560
40 % 7 8 5209
30 % 7 8 4682
Entity #9 | Chains: I,T
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46100
95 % 4 5 12672
90 % 4 5 12475
70 % 4 5 11709
50 % 4 5 10498
40 % 4 5 9524
30 % 4 5 8312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.