Sequence Similarity Clusters for the Entities in PDB 1KYI

Entity #1 | Chains: A,B,C,D,E,F,S,T,U,V,W,X
ATP-dependent hsl protease ATP-binding subunit hslU protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 1637
95 % 3 4 2177 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.6
PDBFlex
90 % 3 4 2236
70 % 10 16 572
50 % 10 16 618
40 % 10 16 646
30 % 10 16 646
Entity #2 | Chains: G,H,I,J,K,L,M,N,O,P,Q,R
ATP-dependent protease hslV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 903
95 % 5 6 1225 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 5 6 1256
70 % 13 16 444
50 % 19 23 322
40 % 19 23 342
30 % 19 23 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.