Sequence Similarity Clusters for the Entities in PDB 1KY8

Entity #1 | Chains: A
glyceraldehyde-3-phosphate dehydrogenase protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54138
95 % 5 8 9506 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 8 9391
70 % 5 8 8972
50 % 5 8 8186
40 % 5 8 7478
30 % 225 288 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1UXT 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) GLUCOSE 1-PHOSPHATE AND NAD BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
2 1UXN 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) AMP AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
3 1UXR 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) FRUCTOSE 6-PHOSPHATE AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
4 1UXU 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) GLYCERALDEHYDE 3-PHOSPHATE, AMP AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
5 1KY8 1 A glyceraldehyde-3-phosphate dehydrogenase 2271 1.2.1.90 | Details
6 1UXQ 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) GLUCOSE 1-PHOSPHATE AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
7 1UXV 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) AMP AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details
8 1UXP 1 A GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) ADP AND NADP(H) BOUND NONCOVALENTLY 2271 1.2.1.90 | Details