Sequence Similarity Clusters for the Entities in PDB 1KXV

Entity #1 | Chains: A,B
ALPHA-AMYLASE, PANCREATIC protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 6979
95 % 3 17 2652 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 17 2702
70 % 17 78 581
50 % 18 82 596
40 % 18 91 565
30 % 18 91 562
Entity #2 | Chains: C,D
CAMELID VHH DOMAIN CAB10 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46141
95 % 1 1 34547
90 % 1 1 33002
70 % 1 1 29364
50 % 75 580 7
40 % 106 933 5
30 % 117 1061 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5U3A 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
2 4X9Y 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
3 5EMY 1 A Pancreatic alpha-amylase The residue (XEP) is a modified Aspartate with the complexed Glucosyl-epi-cyclophellitol UNP residues 16-511 9606 3.2.1.1 | Details
4 4GQR 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
5 1HX0 1 A ALPHA AMYLASE (PPA) 9823 3.2.1.1 | Details
6 5E0F 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
7 4GQQ 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
8 4W93 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
9 3IJ8 1 A Pancreatic alpha-amylase human pancreatic alpha-amylase 9606 3.2.1.1 | Details
10 3DHP 1 A Alpha-amylase 1 9606 3.2.1.1 | Details
11 3OLI 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
12 3OLE 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
13 1Z32 1 X Salivary alpha-amylase 9606 3.2.1.1 | Details
14 3BLP 1 X Alpha-amylase 1 9606 3.2.1.1 | Details
15 1SMD 1 A AMYLASE HUMAN SALIVARY AMYLASE 9606 3.2.1.1 | Details
16 1JAE 1 A ALPHA-AMYLASE RESIDUES 1 - 471 7067 3.2.1.1 | Details
17 1KXQ 1 A, B, C, D alpha-amylase, pancreatic 9823 3.2.1.1 | Details
18 1KXV 1 A, B ALPHA-AMYLASE, PANCREATIC 9823 3.2.1.1 | Details
19 1G94 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
20 1G9H 1 A ALPHA-AMYLASE COMPLEXED WITH TRI-SACCHARIDE AND TRIS 228 3.2.1.1 | Details
21 1AQM 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
22 1HNY 1 A HUMAN PANCREATIC ALPHA-AMYLASE 9606 3.2.1.1 | Details
23 3L2M 1 A Pancreatic alpha-amylase residues 16-511 9823 3.2.1.1 | Details
24 3BAX 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
25 5KEZ 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
26 3BAI 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
27 1DHK 1 A PORCINE PANCREATIC ALPHA-AMYLASE 9823 3.2.1.1 | Details
28 3IJ9 1 A Pancreatic alpha-amylase human pancreatic alpha-amylase 9606 3.2.1.1 | Details
29 1KBK 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
30 3L2L 1 A Pancreatic alpha-amylase residues 16-511 9823 3.2.1.1 | Details
31 1KBB 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
32 3BAK 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
33 1JXK 1 A Alpha-amylase, salivary lacking the loop residues 306-310 9606 3.2.1.1 | Details
34 1XGZ 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
35 1U2Y 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
36 1XCX 1 A Alpha-amylase 9606 3.2.1.1 | Details
37 1U30 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
38 1AQH 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
39 1CLV 1 A PROTEIN (ALPHA-AMYLASE) 7067 3.2.1.1 | Details
40 1WO2 1 A Alpha-amylase, pancreatic 9823 3.2.1.1 | Details
41 1MFU 1 A alpha-amylase, Salivary 9606 3.2.1.1 | Details
42 3BAW 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
43 1JXJ 1 A Alpha-amylase, salivary 9606 3.2.1.1 | Details
44 1XH0 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
45 2CPU 1 A ALPHA-AMYLASE 9606 3.2.1.1 | Details
46 1JFH 1 A ALPHA-AMYLASE COMPLEXED WITH METHYL 4,4'-DITHIO-ALPHA-MALTOTRIOSIDE 9823 3.2.1.1 | Details
47 1MFV 1 A alpha-amylase, salivary 9606 3.2.1.1 | Details
48 2QV4 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
49 1CPU 1 A PROTEIN (ALPHA-AMYLASE) MODIFIED ACARBOSE BOUND AT ACTIVE SITE 9606 3.2.1.1 | Details
50 1XH1 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
51 3OLD 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
52 1U33 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
53 1Q4N 1 X Alpha-amylase, salivary 9606 3.2.1.1 | Details
54 3BLK 1 A Alpha-amylase 1 9606 3.2.1.1 | Details
55 1XCW 1 A Alpha-amylase 9606 3.2.1.1 | Details
56 3CPU 1 A ALPHA-AMYLASE A PART OF ACARBOSE INHIBITOR, DISACCHARIDE GLC(499)-GLC(500) CHAIN B, OBSERVED AT ACTIVE SITE 9606 3.2.1.1 | Details
57 1L0P 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
58 1XD0 1 A Alpha-amylase 9606 3.2.1.1 | Details
59 1BSI 1 A ALPHA-AMYLASE 9606 3.2.1.1 | Details
60 3BAY 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
61 1NM9 1 A Alpha-amylase, salivary 9606 3.2.1.1 | Details
62 1UA3 1 A Alpha-amylase, pancreatic 9823 3.2.1.1 | Details
63 3IJ7 1 A Pancreatic alpha-amylase Human Pancreatic alpha-amylase 9606 3.2.1.1 | Details
64 1KGU 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
65 1KGX 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
66 3BAJ 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
67 1PPI 1 A ALPHA-AMYLASE 9823 3.2.1.1 | Details
68 1XH2 1 A Alpha-amylase, pancreatic 9606 3.2.1.1 | Details
69 1KXT 1 A, C, E ALPHA-AMYLASE, PANCREATIC 9823 3.2.1.1 | Details
70 1KXH 1 A alpha-amylase 228 3.2.1.1 | Details
71 1KGW 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
72 1KB3 1 A ALPHA-AMYLASE, PANCREATIC 9606 3.2.1.1 | Details
73 5TD4 1 A Pancreatic alpha-amylase UNP residues 16-511 9606 3.2.1.1 | Details
74 1PIG 1 A ALPHA-AMYLASE 9823 3.2.1.1 | Details
75 1XD1 1 A Alpha-amylase 9606 3.2.1.1 | Details
76 1JD7 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
77 1PIF 1 A ALPHA-AMYLASE 9823 3.2.1.1 | Details
78 2QMK 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
79 1C8Q 1 A ALPHA-AMYLASE 9606 3.2.1.1 | Details
80 1OSE 1 A PORCINE ALPHA-AMYLASE 9823 3.2.1.1 | Details
81 3OLG 1 A Pancreatic alpha-amylase 9606 3.2.1.1 | Details
82 1B0I 1 A PROTEIN (ALPHA-AMYLASE) 228 3.2.1.1 | Details
83 1BVN 1 P PROTEIN (ALPHA-AMYLASE) 9823 3.2.1.1 | Details
84 1JD9 1 A ALPHA-AMYLASE 228 3.2.1.1 | Details
85 1TMQ 1 A PROTEIN (ALPHA-AMYLASE) 7067 3.2.1.1 | Details
86 4X0N 1 A Pancreatic alpha-amylase UNP residues 16-511 9823 3.2.1.1 | Details
87 1VAH 1 A Alpha-amylase, pancreatic 9823 3.2.1.1 | Details
88 3VM5 1 A alpha-amylase 8090
89 1B2Y 1 A PROTEIN (ALPHA-AMYLASE) 9606 3.2.1.1 | Details
90 1XV8 1 A, B Alpha-amylase HSA 9606 3.2.1.1 | Details
91 1VIW 1 A ALPHA-AMYLASE 7067 3.2.1.1 | Details