Sequence Similarity Clusters for the Entities in PDB 1KXT

Entity #1 | Chains: A,C,E
ALPHA-AMYLASE, PANCREATIC protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6586
95 % 11 17 2510
90 % 11 17 2559
70 % 61 77 538
50 % 63 81 557
40 % 68 90 544
30 % 68 90 546
Entity #2 | Chains: B,D,F
IMMUNOGLOBULIN VHH FRAGMENT protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 27743
95 % 1 1 22997
90 % 1 1 22268
70 % 127 336 10
50 % 183 519 8
40 % 306 858 5
30 % 349 984 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.