Sequence Similarity Clusters for the Entities in PDB 1KXP

Entity #1 | Chains: A
ACTIN,ALPHA SKELETAL MUSCLE protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 123 22
95 % 60 178 15
90 % 62 183 15
70 % 64 187 23
50 % 64 190 37
40 % 65 209 39
30 % 66 229 52
Entity #2 | Chains: D
HUMAN VITAMIN D-BINDING PROTEIN protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24848
95 % 1 6 7340 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.5
PDBFlex
90 % 1 6 7300
70 % 1 6 7087
50 % 1 6 6532
40 % 1 6 6091
30 % 1 6 5457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.