Sequence Similarity Clusters for the Entities in PDB 1KXP

Entity #1 | Chains: A
ACTIN,ALPHA SKELETAL MUSCLE protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 44 123 23
95 % 60 179 15 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 62 184 15
70 % 64 189 23
50 % 64 192 36
40 % 65 211 41
30 % 66 231 53
Entity #2 | Chains: D
HUMAN VITAMIN D-BINDING PROTEIN protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25302
95 % 1 6 7468
90 % 1 6 7423
70 % 1 6 7241
50 % 1 6 6660
40 % 1 6 6206
30 % 1 6 5554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.