Sequence Similarity Clusters for the Entities in PDB 1KXE

Entity #1 | Chains: A
SINDBIS VIRUS CAPSID PROTEIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53743
95 % 10 11 3468 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 10 11 3531
70 % 17 21 1318
50 % 19 24 1134
40 % 19 24 1139
30 % 19 24 1139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures