Sequence Similarity Clusters for the Entities in PDB 1KXC

Entity #1 | Chains: A
SINDBIS VIRUS CAPSID PROTEIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20320
95 % 9 11 3608 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 9 11 3672
70 % 16 21 1381
50 % 18 24 1177
40 % 18 24 1179
30 % 18 24 1176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures