Sequence Similarity Clusters for the Entities in PDB 1KXC

Entity #1 | Chains: A
SINDBIS VIRUS CAPSID PROTEIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19751
95 % 9 11 3514 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 9 11 3582
70 % 16 21 1340
50 % 18 24 1154
40 % 18 24 1159
30 % 18 24 1151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures