Sequence Similarity Clusters for the Entities in PDB 1KXB

Entity #1 | Chains: A
SINDBIS VIRUS CAPSID PROTEIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 19500
95 % 5 11 3467 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 5 11 3532
70 % 12 21 1318
50 % 14 24 1131
40 % 14 24 1136
30 % 14 24 1134

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures