Sequence Similarity Clusters for the Entities in PDB 1KWO

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN protein, length: 835 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 3416
95 % 9 14 4191 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.9
PDBFlex
90 % 11 17 3323
70 % 15 21 2684
50 % 24 50 441
40 % 70 101 280
30 % 92 126 234
Entity #2 | Chains: B
MYOSIN REGULATORY LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 18 2601
95 % 13 18 3243 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 13 18 3291
70 % 18 24 2101
50 % 23 47 503
40 % 217 336 34
30 % 238 363 47
Entity #3 | Chains: C
MYOSIN ESSENTIAL LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 17 2820
95 % 18 24 2053 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 18 24 2104
70 % 18 24 2104
50 % 22 28 1796
40 % 218 336 34
30 % 239 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.