Sequence Similarity Clusters for the Entities in PDB 1KWO

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN protein, length: 835 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 4286
95 % 9 14 4615 Flexibility: High
Max RMSD: 28.4, Avg RMSD: 13.2
PDBFlex
90 % 11 17 3710
70 % 15 21 2934
50 % 61 91 350
40 % 74 111 274
30 % 94 135 236
Entity #2 | Chains: B
MYOSIN REGULATORY LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 18 3097
95 % 13 18 3400 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 13 18 3460
70 % 18 24 2180
50 % 23 47 539
40 % 229 361 40
30 % 285 432 42
Entity #3 | Chains: C
MYOSIN ESSENTIAL LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 22 2030
95 % 17 22 2328 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 18 24 2172
70 % 18 24 2179
50 % 22 28 1885
40 % 230 361 40
30 % 286 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures