Sequence Similarity Clusters for the Entities in PDB 1KWH

Entity #1 | Chains: A
Macromolecule-Binding Periplasmic Protein protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11270
95 % 3 7 7192 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 3 7 7160
70 % 8 14 3609
50 % 8 14 3530
40 % 12 19 1816
30 % 18 26 1175

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures