Sequence Similarity Clusters for the Entities in PDB 1KVO

Entity #1 | Chains: A,B,C,D,E,F
HUMAN PHOSPHOLIPASE A2 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 14 1642
95 % 5 17 1673 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 5 17 1715
70 % 5 17 1728
50 % 96 181 146
40 % 158 307 100
30 % 158 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures