Sequence Similarity Clusters for the Entities in PDB 1KVE

Entity #1 | Chains: A,C
SMK TOXIN protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23334
95 % 1 2 18168 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 17713
70 % 1 2 15173
50 % 1 2 13330
40 % 1 2 11938
30 % 1 2 10101
Entity #2 | Chains: B,D
SMK TOXIN protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20035
95 % 1 2 18169 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 17714
70 % 1 2 16388
50 % 1 2 14324
40 % 1 2 12777
30 % 1 2 10764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures