Sequence Similarity Clusters for the Entities in PDB 1KVE

Entity #1 | Chains: A,C
SMK TOXIN protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25375
95 % 1 2 21599 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 20972
70 % 1 2 19247
50 % 1 2 16702
40 % 1 2 14883
30 % 1 2 12734
Entity #2 | Chains: B,D
SMK TOXIN protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25210
95 % 1 2 21454 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 20833
70 % 1 2 19119
50 % 1 2 16574
40 % 1 2 14768
30 % 1 2 12630

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures