Sequence Similarity Clusters for the Entities in PDB 1KVE

Entity #1 | Chains: A,C
SMK TOXIN protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24992
95 % 1 2 21287 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 20677
70 % 1 2 18987
50 % 1 2 16491
40 % 1 2 14700
30 % 1 2 12576
Entity #2 | Chains: B,D
SMK TOXIN protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24833
95 % 1 2 21150 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 20546
70 % 1 2 18867
50 % 1 2 16370
40 % 1 2 14592
30 % 1 2 12479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures