Sequence Similarity Clusters for the Entities in PDB 1KV3

Entity #1 | Chains: A,B,C,D,E,F
Protein-glutamine gamma-glutamyltransferase protein, length: 687 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10165
95 % 5 7 3909 Flexibility: High
Max RMSD: 29.4, Avg RMSD: 11.8
PDBFlex
90 % 5 7 3952
70 % 5 7 3907
50 % 5 7 3797
40 % 6 8 3472
30 % 23 26 1093

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures