Sequence Similarity Clusters for the Entities in PDB 1KUQ

Entity #1 | Chains: B
16S RIBOSOMAL RNA FRAGMENT rna, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
30S RIBOSOMAL PROTEIN S15 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69173
95 % 81 278 38 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 81 278 43
70 % 81 278 53
50 % 103 426 25
40 % 103 431 35
30 % 103 431 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.