Sequence Similarity Clusters for the Entities in PDB 1KUP

Entity #1 | Chains: A
integrin alpha-IIb protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
integrin beta-3 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 50410
95 % 1 2 37695
90 % 1 2 35972
70 % 1 2 31988
50 % 1 2 27372
40 % 1 2 24209
30 % 1 2 20607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures