Sequence Similarity Clusters for the Entities in PDB 1KUM

Entity #1 | Chains: A
GLUCOAMYLASE protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9082
95 % 5 5 9032
90 % 5 5 8930
70 % 5 5 8581
50 % 5 5 7842
40 % 5 5 7190
30 % 5 5 6265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5GHL 1 A, B, C, D Glucoamylase UNP residues 533-640, starch-binding domain of glucoamylase from Aspergillus niger 5061 3.2.1.3 | Details
2 1AC0 1 A GLUCOAMYLASE BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
3 1ACZ 1 A GLUCOAMYLASE STARCH-BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
4 1KUL 1 A GLUCOAMYLASE PH 5.2, 313 K BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
5 1KUM 1 A GLUCOAMYLASE PH 5.2, 313 K BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details