Sequence Similarity Clusters for the Entities in PDB 1KUM

Entity #1 | Chains: A
GLUCOAMYLASE protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9831
95 % 5 5 9759
90 % 5 5 9625
70 % 5 5 9233
50 % 5 5 8381
40 % 5 5 7680
30 % 5 5 6684

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5GHL 1 A, B, C, D Glucoamylase UNP residues 533-640, starch-binding domain of glucoamylase from Aspergillus niger 5061 3.2.1.3 | Details
2 1AC0 1 A GLUCOAMYLASE BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
3 1ACZ 1 A GLUCOAMYLASE STARCH-BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
4 1KUL 1 A GLUCOAMYLASE PH 5.2, 313 K BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details
5 1KUM 1 A GLUCOAMYLASE PH 5.2, 313 K BINDING DOMAIN, RESIDUES 509 - 616 5061 3.2.1.3 | Details