Sequence Similarity Clusters for the Entities in PDB 1KUK

Entity #1 | Chains: A
metalloproteinase protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28969
95 % 3 4 19366 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 18854
70 % 3 6 10233
50 % 7 24 2220
40 % 7 27 1774
30 % 10 35 1265
Entity #2 | Chains: B
EKW protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures