Sequence Similarity Clusters for the Entities in PDB 1KUJ

Entity #1 | Chains: A,C,E,G
JACALIN ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 21 433
95 % 22 31 341 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 23 32 352
70 % 24 36 350
50 % 28 46 276
40 % 28 46 294
30 % 50 87 199
Entity #2 | Chains: B,D,F,H
JACALIN BETA CHAIN protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.