Sequence Similarity Clusters for the Entities in PDB 1KU6

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 549 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 63 204
95 % 69 86 205 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 69 86 216
70 % 84 107 171
50 % 196 244 104
40 % 196 244 129
30 % 255 329 76
Entity #2 | Chains: B
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 7509
95 % 4 10 7421 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 4 10 7368
70 % 5 11 6358
50 % 18 37 1361
40 % 43 123 302
30 % 44 125 300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.