Sequence Similarity Clusters for the Entities in PDB 1KTZ

Entity #1 | Chains: A
TRANSFORMING GROWTH FACTOR BETA 3 protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 9413
95 % 2 5 9298 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 2 5 9198
70 % 6 16 1744
50 % 6 16 1824
40 % 17 65 453
30 % 18 69 441
Entity #2 | Chains: B
TGF-beta Type II Receptor protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40470
95 % 5 9 6402 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 9 6391
70 % 5 9 6222
50 % 5 10 4918
40 % 5 10 4622
30 % 5 10 4160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures