Sequence Similarity Clusters for the Entities in PDB 1KTZ

Entity #1 | Chains: A
TRANSFORMING GROWTH FACTOR BETA 3 protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 9950
95 % 2 5 10006
90 % 2 5 9886
70 % 6 16 1733
50 % 6 16 1767
40 % 6 16 1773
30 % 17 66 437
Entity #2 | Chains: B
TGF-beta Type II Receptor protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 11000
95 % 5 9 6202 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 9 6199
70 % 5 9 6044
50 % 5 10 5021
40 % 5 10 4750
30 % 5 10 4341

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures