Sequence Similarity Clusters for the Entities in PDB 1KTW

Entity #1 | Chains: A,B
IOTA-CARRAGEENASE protein, length: 464 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11393
95 % 2 3 11274 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 3 11125
70 % 2 3 10542
50 % 2 3 9522
40 % 2 3 8712
30 % 2 3 7672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.