Sequence Similarity Clusters for the Entities in PDB 1KTT

Entity #1 | Chains: A
thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 246 338 45
95 % 247 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 247 339 67
70 % 247 341 78
50 % 247 341 107
40 % 247 341 131
30 % 247 341 138
Entity #2 | Chains: B
thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 218 290 58
95 % 274 377 36 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 277 384 39
70 % 283 408 46
50 % 283 408 84
40 % 1310 1720 4
30 % 1408 1870 6
Entity #3 | Chains: C
hirudin IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures