Sequence Similarity Clusters for the Entities in PDB 1KTT

Entity #1 | Chains: A
thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 243 334 53
95 % 247 342 63 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 247 342 67
70 % 247 342 81
50 % 247 342 112
40 % 247 342 135
30 % 247 342 146
Entity #2 | Chains: B
thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 244 332 52
95 % 274 378 53 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 277 385 56
70 % 283 409 47
50 % 283 409 85
40 % 1416 1885 4
30 % 1424 1899 7
Entity #3 | Chains: C
hirudin IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures