Sequence Similarity Clusters for the Entities in PDB 1KTT

Entity #1 | Chains: A
thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 244 335 45
95 % 245 336 61 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 245 336 66
70 % 245 338 78
50 % 245 338 107
40 % 245 338 131
30 % 245 338 136
Entity #2 | Chains: B
thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 219 290 57
95 % 272 374 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 275 381 39
70 % 281 405 46
50 % 281 405 84
40 % 1292 1698 4
30 % 1390 1848 6
Entity #3 | Chains: C
hirudin IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures