Sequence Similarity Clusters for the Entities in PDB 1KTS

Entity #1 | Chains: A
thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 291 338 45
95 % 292 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 292 339 67
70 % 293 341 78
50 % 293 341 109
40 % 293 341 132
30 % 293 341 140
Entity #2 | Chains: B
thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 250 290 75
95 % 324 377 52 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 328 384 48
70 % 340 408 46
50 % 340 408 84
40 % 1601 1864 4
30 % 1612 1886 6
Entity #3 | Chains: C
hirudin IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures