Sequence Similarity Clusters for the Entities in PDB 1KTR

Entity #1 | Chains: L
Anti-his tag antibody 3d5 variable light chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62796
95 % 1 5 9833
90 % 6 13 3097
70 % 11 19 2040
50 % 186 288 21
40 % 529 819 5
30 % 597 945 8
Entity #2 | Chains: M
Peptide linker protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69595
95 % 1 1 48627
90 % 1 1 46247
70 % 1 1 40757
50 % 1 1 34963
40 % 1 1 30899
30 % 1 1 26254
Entity #3 | Chains: H
Anti-his tag antibody 3d5 variable heavy chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62964
95 % 1 1 43329
90 % 1 2 17754
70 % 39 78 233
50 % 312 486 8
40 % 530 819 5
30 % 598 945 8
Entity #4 | Chains: P
Oligohistidine peptide Antigen protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.