Sequence Similarity Clusters for the Entities in PDB 1KTR

Entity #1 | Chains: L
Anti-his tag antibody 3d5 variable light chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67092
95 % 1 5 10600
90 % 6 13 3321
70 % 12 20 1847
50 % 192 303 21
40 % 571 897 5
30 % 639 1023 7
Entity #2 | Chains: M
Peptide linker protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74191
95 % 1 1 51875
90 % 1 1 49228
70 % 1 1 43181
50 % 1 1 36923
40 % 1 1 32613
30 % 1 1 27725
Entity #3 | Chains: H
Anti-his tag antibody 3d5 variable heavy chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67271
95 % 1 1 46366
90 % 1 2 19131
70 % 41 82 258
50 % 348 549 8
40 % 572 897 5
30 % 640 1023 7
Entity #4 | Chains: P
Oligohistidine peptide Antigen protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.