Sequence Similarity Clusters for the Entities in PDB 1KTP

Entity #1 | Chains: A
C-PHYCOCYANIN ALPHA SUBUNIT protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 6652
95 % 5 13 4673
90 % 5 13 4696
70 % 8 29 362
50 % 8 35 358
40 % 9 44 276
30 % 22 118 124
Entity #2 | Chains: B
C-PHYCOCYANIN BETA SUBUNIT protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 3937
95 % 5 13 4666
90 % 5 13 4688
70 % 8 32 360
50 % 14 52 227
40 % 14 72 191
30 % 23 118 124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.