Sequence Similarity Clusters for the Entities in PDB 1KTP

Entity #1 | Chains: A
C-PHYCOCYANIN ALPHA SUBUNIT protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 7234
95 % 5 14 4753
90 % 5 14 4768
70 % 8 31 376
50 % 8 37 409
40 % 9 46 286
30 % 22 124 125
Entity #2 | Chains: B
C-PHYCOCYANIN BETA SUBUNIT protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 14 3958
95 % 5 14 4742
90 % 5 14 4759
70 % 8 34 375
50 % 14 54 248
40 % 14 76 199
30 % 23 124 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.