Sequence Similarity Clusters for the Entities in PDB 1KTP

Entity #1 | Chains: A
C-PHYCOCYANIN ALPHA SUBUNIT protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 6849
95 % 5 13 4806
90 % 5 13 4825
70 % 8 30 369
50 % 8 36 382
40 % 9 45 279
30 % 22 120 122
Entity #2 | Chains: B
C-PHYCOCYANIN BETA SUBUNIT protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 4048
95 % 5 13 4800
90 % 5 13 4819
70 % 8 33 368
50 % 14 53 232
40 % 14 73 195
30 % 23 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.