Sequence Similarity Clusters for the Entities in PDB 1KTP

Entity #1 | Chains: A
C-PHYCOCYANIN ALPHA SUBUNIT protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 9 6908
95 % 5 13 4844
90 % 5 13 4860
70 % 8 30 372
50 % 8 36 387
40 % 9 45 283
30 % 22 120 122
Entity #2 | Chains: B
C-PHYCOCYANIN BETA SUBUNIT protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 13 4076
95 % 5 13 4838
90 % 5 13 4854
70 % 8 33 371
50 % 14 53 235
40 % 14 73 197
30 % 23 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.