Sequence Similarity Clusters for the Entities in PDB 1KTL

Entity #1 | Chains: A,C
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18092
95 % 7 9 3009
90 % 7 9 3052
70 % 619 638 7
50 % 621 643 7
40 % 658 685 11
30 % 764 801 14
Entity #2 | Chains: B,D
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 528 552 2
95 % 570 595 3
90 % 579 604 4
70 % 794 831 5
50 % 810 851 5
40 % 810 851 9
30 % 810 851 12
Entity #3 | Chains: P,Q
Peptide VTAPRTLLL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.