Sequence Similarity Clusters for the Entities in PDB 1KTK

Entity #1 | Chains: A,B,C,D
Exotoxin type C protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12889
95 % 3 3 12390 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.8
PDBFlex
90 % 3 3 12191
70 % 3 3 11495
50 % 3 3 10272
40 % 5 5 5009
30 % 88 88 322
Entity #2 | Chains: E,F
T-cell receptor beta chain protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38467
95 % 1 1 29697 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 2.6
PDBFlex
90 % 10 10 4730
70 % 299 302 41
50 % 302 305 77
40 % 302 305 93
30 % 5164 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.