Sequence Similarity Clusters for the Entities in PDB 1KTK

Entity #1 | Chains: A,B,C,D
Exotoxin type C protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 13198
95 % 3 3 12662
90 % 3 3 12457
70 % 3 3 11736
50 % 3 3 10492
40 % 5 5 5119
30 % 89 89 332
Entity #2 | Chains: E,F
T-cell receptor beta chain protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39295
95 % 1 1 30307
90 % 10 10 4855
70 % 311 314 28
50 % 314 317 73
40 % 314 317 94
30 % 5392 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures