Sequence Similarity Clusters for the Entities in PDB 1KTB

Entity #1 | Chains: A
alpha-N-acetylgalactosaminidase protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36337
95 % 1 2 30961 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 2 29668
70 % 6 9 4395
50 % 7 26 1204
40 % 9 29 1148
30 % 11 31 1092

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures